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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824304.1_cds_XP_016501834.1_15534
CDS Infomation

[gene=LOC107820135] [db_xref=GeneID:107820135] [protein=D-2-hydroxyglutarate dehydrogenase, mitochondrial-like isoform X3] [protein_id=XP_016501834.1] [location=join(2702..2767,2883..2984,3345..3392,3599..3669,4189..4307,4599..4694,4780..4889,4982..5062,5408..5508,10287..10395,11584..11689,12000..12085,12164..12289,13061..13156,13246..13260)] [gbkey=CDS]
Sequence

ATGGATTGGATGAGGAAATACAAGGGCACCAGTAAGCTCATGCTCCAACCTCGGTCAGCA
GCAGAGGTCTCTCAGATTCTTAAATATTGCAGTTCCAGGAGCCTATCTGTTGTTCCTCAA
GGGGGGAATACAGGTCTTGTGGGAGGAAGTGTACCTGCTTTTGATGAGGTGATTGTTAAT
ACCAGTCATATGAATAAAATCATTTCTTTCGACAAGGTTAGCGGCATACTGGTTTGTGAG
GCAGGATGCATTTTGGAAAATCTCATCGCTTTTCTTGATAACCAAGGGTTTGTTATGCCA
CTAGATTTAGGTGCTAAAGGAAGCTGTCAAATTGGAGGAAATGTCTCAACCAATGCTGGT
GGTTTGCGGCTTCTCCGCTATGGTTCACTGCATGGCAGCGTCCTGGGTCTTGAAGTGGTT
TTAGCAAATGGAACGGTGCTTGATATGCTCGGCACATTGCGAAAAGATAACACTGGATAT
GACTTGAAACATTTATTTATAGGAAGTGAAGGATCCTTGGGGATTGTAACAAAGGTTTCC
ATACTAACTCCTCCAAAGTTGTCCTCTGTAAATGTGTGCTTTCTTGCTTGTTCAGATTAT
GCAAGCTGCCTGAAACTTTTGTTAGACGCGAAGAGGAAACTTGGGGAAATTCTTTCTGCA
TTTGAATTCCTTGATCATGATGCAATGGATCTGGTCCTGAAACATTTAGAAGGTGTCCGT
AATCCATTTCCTTCCGCAATGCATAACTTTTATGTTCTGATTGAGACAACTGGCAGTAGT
GAATCTTATGACAGAGAGAAACTGGATGCTTTCTTGCTTCACTCAATGGAAAATGGCTTG
ATAAGTGATGGAGTTGTTGCACAAGATATAACTCAGGCATCTTCTTGCTGGCATATTCGT
GAGGGCATTCCTGAAGCTTTGATGAAGGCAGGAGGTGTATATAAATATGATTTGTCAATA
CCGGTTGAAAAATTGTATGATCTTGTTGAGGAAATGCGAGTCCGACTTGATGCTTCAGCA
AAAGTAATTGCTTATGGTCACCTTGGGGATGGCAACTTACATCTTAATATTTCAACTCCT
CAGTATGATGATAATATTTTATCACAGATCGAGCCTTTCGTTTATGAATGGACTTCTAAG
CACAAAGGGAGTATTAGTGCCGAACATGGCCTTGGACTGATGAAAGCCAATAAAATCCAT
TACAGCAAGTCACCTGAAACTGTGCAACTAATGGCTTCTATTAAGAAGCTACTGGACCCT
AACGGGATTCTGAACCCATATAAAGTTCTCCCACCTTCCCTTTTCTCAAAAGCTGAGATA
TATACAGAATGA

Peptide Sequence

PEP ID

XP_016501834.1
PEP Infomation

PREDICTED: D-2-hydroxyglutarate dehydrogenase, mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MDWMRKYKGTSKLMLQPRSAAEVSQILKYCSSRSLSVVPQGGNTGLVGGSVPAFDEVIVN
TSHMNKIISFDKVSGILVCEAGCILENLIAFLDNQGFVMPLDLGAKGSCQIGGNVSTNAG
GLRLLRYGSLHGSVLGLEVVLANGTVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVS
ILTPPKLSSVNVCFLACSDYASCLKLLLDAKRKLGEILSAFEFLDHDAMDLVLKHLEGVR
NPFPSAMHNFYVLIETTGSSESYDREKLDAFLLHSMENGLISDGVVAQDITQASSCWHIR
EGIPEALMKAGGVYKYDLSIPVEKLYDLVEEMRVRLDASAKVIAYGHLGDGNLHLNISTP
QYDDNILSQIEPFVYEWTSKHKGSISAEHGLGLMKANKIHYSKSPETVQLMASIKKLLDP
NGILNPYKVLPPSLFSKAEIYTE

Transcript Sequence

Gene sequence data has not been registered.